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Update Apptainer cache directory path

Open CodingKaiser opened this issue 2 months ago • 1 comments


name: New Config about: A new cluster config

Please follow these steps before submitting your PR:

  • [ ] If your PR is a work in progress, include [WIP] in its title
  • [ ] Your PR targets the master branch
  • [ ] You've included links to relevant issues, if any

Steps for adding a new config profile:

  • [ ] Add your custom config file to the conf/ directory
  • [ ] Add your documentation file to the docs/ directory
  • [ ] Add your custom profile to the nfcore_custom.config file in the top-level directory
  • [ ] Add your profile name to the profile: scope in .github/workflows/main.yml
  • [ ] OPTIONAL: Add your custom profile path and GitHub user name to .github/CODEOWNERS (**/<custom-profile>** @<github-username>)

CodingKaiser avatar Oct 17 '25 11:10 CodingKaiser

If you haven't received it before, here's your "mandatory" warning that having a system wide image cachedir is generally not a good idea for larger clusters (basically, it makes anyone running nf-core pipelines with that profile fully trust everyone else on the system enough to run their code as themselves).

Using a libraryDir that's managed by a trusted set of users is generally a much better idea.

pontus avatar Oct 17 '25 13:10 pontus