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Port bedtools_genomecov from local to nf-core module

Open FloWuenne opened this issue 6 months ago • 0 comments

Description of feature

Description

Currently, the bedtools_genomecov module is implemented as a local module. There is however an nf-core module for it https://nf-co.re/modules/bedtools_genomecov. The local module should probably be ported to the nf-core module to ensure maintenance and allow users to set parameter space using ext.args, instead of relying on hard coded parameters for every execution, for example --bg / --bga (as described in https://github.com/nf-core/chipseq/issues/468)

FloWuenne avatar Jun 24 '25 19:06 FloWuenne