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Published 20 hours ago • verified publisher icon nf-core

Produce relative abundance mean values per group

Open d4straub opened this issue 3 years ago • 1 comments

Description of feature

This relates to https://github.com/nf-core/ampliseq/issues/368#issuecomment-1041150714

Essentially, it would be nice to use the provided metadata to make relative abundance means across groups and probably immediately barplots with QIIME2.

d4straub avatar Mar 08 '22 12:03 d4straub

So that could be either solved by QIIME2 with qiime feature-table group or via phyloseq with merge_samples.

d4straub avatar Apr 06 '22 13:04 d4straub

That's in 2.4.0dev now.

d4straub avatar Oct 10 '22 13:10 d4straub