amptk

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related with SynMock

2

Hello, not sure if this is the right place to ask this question, but I will give it a try. As regards the publication i: https://doi.org/10.1101/213470, have you added the...

mbcarbonetto

Illumina: Set Merge Options

2

Hello I'm testing amptk on some ITS data. The "amptk illumina" log shows some values like: ######################################### Merging reads 100% 107030 Pairs 8000 Merged (7.5%) 99030 Not merged (92.5%) Pairs...

Aciole-David

Nanopore

11

Is there anything in the structure of amptk that would prohibit using Nanopore amplicon data as input? Fragment lengths are ~1500 bp. Input fastq are already adapter and quality trimmed...

devonorourke