Chunlei Wu
Chunlei Wu
Great! Thank you all for pointing us to SEMOASA. It's exactly the piece I thought missing in the OpenAPI ecosystem. Glad you guys have stepped up and created one already....
@MikeRalphson thanks, we will give it a try.
@MikeRalphson got it. We will continue watching this thread then :-)
@willgdjones I want to add that, although the current [myvariant batch query](http://docs.myvariant.info/en/latest/doc/variant_query_service.html#batch-queries-via-post) does not support the type of batch queries you asked, I think it could be a very useful...
@andrewsu can you please locate the particular data file or the download page?
@hkarakurt8742 this is how `_id` field in myvariant is defined: https://docs.myvariant.info/en/latest/doc/data.html#id-field when there is no proper mapping to chr, other HGVS names are used, e.g. some variants mapped only to...
@tdeboer-ilmn "refseq.rna" field from MyGene.info? http://mygene.info/v3/gene/1017?fields=refseq
Hi @reece thanks for bringing up this issue. What's missing for myvariant.info is a way to compute all equivalent HGVS names for a give (chr, pos, ref, alt) set. If...
Regarding the variant id MyVariant.info is using, we know it's in-perfect. We always hope the community will come up a way to define canonical variant id. We started to evaluate...
@reece An id like `chr6:g.152708291G>A` pretty much serves as an internal primary key for the variant object. We avoid using `NC_000006.11:g.152708291G>A` because it's not stable enough (`.ver` could change, like...