kwyk icon indicating copy to clipboard operation
kwyk copied to clipboard

Knowing what you know - Bayesian brain parcellation

Results 9 kwyk issues
Sort by recently updated
recently updated
newest added

@effigies - is there any nibabel based code that does the same thing that `mri_convert -c` does?

I have tried so many different things to address this issue #33 and among them, this Dockerfile can be built without error but when I run the container, TensorFlow does...

when running the container with the master-gpu tag, I am getting the TensorFlow import error. command: `singularity run -B $(pwd):/data -W /data kwyk_master-gpu.sif --help` error: ``` Traceback (most recent call...

Currently one call cannot process multiple input images from the same directory without overwriting output files. A more flexible output file naming approach would be necessary to allow this i.e....

How unfeasible would be to transfer learning a model on to a rat brain? What would it be necessary (e.g., number of animals/scans and input types -anatomical image T1w or...

Hello. I am testing kwyk (docker://neuronets/kwyk:version-0.4-gpu) on brainlife.io I've noticed that the output segmentation/parcellation image contains areas outside the brain segmented. Like this.. ![image](https://user-images.githubusercontent.com/923896/116608919-bf088480-a901-11eb-882b-bf89c7c7e082.png) Is this expected? Should I run...

Would it be possible to perform transfer learning and retrain the model with new parcellations? If so, would be great if you could provide a minimal example. I would like...

It used to work on my laptop, but no longer. I fear it is due to some interaction with GPU being used as an actual graphics card as well, and...

Hi, I was just wondering if ROI specific functionality/exports might be a nice feature or outside the scope of the project? E.g., let's say I only want to have and...