Alper Kucukural

User Groups

1

Users should be added to the groups by searching their names

Published dirs

1

If published directory is not empty, resumed job cannot overwrite and gives error.

warn the user when we cannot access to the cluster like "we cannot connect to Amazon. Would you like to shut it down." after 5 trials for example in every...

yes/no option to remove alignment files in STAR, HISAT2 and Tophat2 after successfull completion of a pipeline.

Setting a time to start a run in the advanced section?

Admin control for the limit for the number of the maximum instances that user can choose.

All started instances on amazon EC2 should be tagged with a userid

To solve the installation problem about d3heatmap. You can use the commands below; ``` if (!require("devtools")) install.packages("devtools") devtools::install_github("rstudio/d3heatmap") if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("debrowser") ```

https is not working

1

**Describe the bug** https://crispresso2.pinellolab.org is no longer working while http://crispresso2.pinellolab.org/ is.