ndrubins

Hi, Due to unsuccessful experiences with `dynamicTreeCut` for finding the optimal number of clusters in a gene expression by samples clustered heat map I've decided to implement my own technique...

Getting an infinite recursion error in get_branches_heights

6

Hi `dendextend` team, I have a: `'dendrogram' with 2 branches and 4872 members total, at height 10.11295 ` (called `dendro`) for which I'm calling: `get_branches_heights(dendro, include_leaves=T) ` On my linux...

Including the cigar field when in bamToBed with the -splitD argument

1

Hi, I'm running `bamToBed` on an RNA-seq `bam` file with the `-splitD` argument in order to view each aligned segment in a different line in the `bed` file, but I...

Using aes_string with ggmosaic

1

Hi, I have compositional data: ``` compositional.df

Hi, This is a usage question or a feature request. Is it possible to have the pies have different patterns (possibly using the `ggpattern` package), in addition to manually defined...

Hi, I'm trying to plot a phylogenetic tree (in the form of a `dendextend::ggdend` object) along with `scatterpie` representing ancestral states in the internal nodes of the tree. I'm running...

Hi, Thanks for the great package!!! I'm following [example 9.3 - "Floating output only from one event on heatmap"](https://jokergoo.github.io/InteractiveComplexHeatmap/reference/htShinyExample.html) but would like to customize the information shown when the heatmap...

An example using RViennaCL for matrix multiplication

3

Hi @cdeterman , Would it be possible to get an example code that does matrix multiplication using RViennaCL? Thanks a lot,

Hi, I'm using `R` on my mac to try and save a `plotly` figure as a `PDF` using `orca`. I have installed `orca` using: `conda install -c plotly plotly-orca`, and...