Nathan Dunn

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Alexie, I’m only doing this automatically via docker. Where you creating a suggestions for doc? If you want to add this bit to the doc, you can just edit directly...

Do you have a diff for the new container? It’s possible there is a jdbc or liquibase update that will fix this. Nathan > On Dec 9, 2019, at 3:14...

ah okay thanks. I'll add it to the 2.6 list

Are you able to @childers it wasn't explicitly handled, but I don't think you'll necessarily run into it either. If so, please post the error here. It should be. a...

It looks like there are 2 versions available , which is a PITA. Even if it parsed JDK 11 correctly it will tell you to use JDK 8 . Sometimes...

Functional annotations on genes in general does not seem to be recorded, but works appropriately for mRNA. Will take a look.

@uliboehme This is "correct" in that history is ONLY for transcripts even though we record it for genes. This is an interface error, but I think we should fix it...

Current features: ``` GetOptions("input|i=s" => \$input_file, "username|u=s" => \$username, "password|p=s" => \$password, "url|U=s" => \$url, "gene_types_in|g=s" => \$gene_types_in, "pseudogene_type_in|n=s" => \$pseudogene_types_in, "transcript_types_in|t=s" => \$transcript_types_in, "exon_types_in|e=s" => \$exon_types_in, "organism|o=s" => \$organism,...