Nathan Dunn

@ctcncgr My guess is that its a bug on my part, but please try what @cmdcolin suggested above first and see what you get. Thanks.

@ctcncgr its probably a problem in the `trackList.json` that we're not properly checking. Can you paste the `trackList.json` and I'll either point out the error and/or fix the code?

@ctcncgr If you could PM me the URL that might be helpful. I'm on the [Apollo gitter](https://gitter.im/GMOD/Apollo). @cmdcolin should be there or on the JBrowse one, as well. Also, could...

@ctcncgr I looked into it further. I don't think we support gzipped indexed FASTA yet in Apollo. I'll have to look into it next week to see if I can't...

So, @ctcncgr I'm not sure what all of the problems are, but we can leave this open in the interim. However, I did get it to work. Steps: 1. rename...

- [ ] handle fna naming - [ ] support gzip more explicitly - [ ] support bgzip more explicitly

Closely related to #2235 

sounds like a bug

@mictadlo if you could provide some screenshots or additional info that would help. Thanks.

https://github.com/alliance-genome/agr_jbrowse_container