Nibal Arzouni

AttributeError: module 'numpy' has no attribute 'int'

3

Hello, When I try to run IDR on two replicates, it gives me the following attribute error: AttributeError: module 'numpy' has no attribute 'int' This is the command I am...

cooler cload pairix is giving segmentation fault

6

Hello, I am running `cooler cload pairix` on a `pairs.gz` file with mm39 chromosome sized file. Running the command will give a `segmentation fault` immediately. Does any one encounter the...

Hello All, I am trying to merge two hic maps, but I received some errors. I hope someone can give a helpful suggestion. I am using the following: 1- I...

Ingesting a gene annotation .bed file, Error: No such file or directory: '/tmp/geneAnnotationsExonUnionsMM39.bed.beddb'

4

Hello, I have a question about an issue using `higlass-manage`. I hope I receive some feedback. I am trying to ingest a gene annotation .bed file, so I can see...

Hello, I am currently using Mustache for loop detection for our MicroC data. Thank you so much for developing Mustache. It is a great tool. I have decided to use...

Running docker container with Mitos is giving an error.

3

Hello All, I am running `MitoHiFi` using singularity container as suggested in the installation. I created a conda env for singularity. I am using `MitoHiFi` with `mitos` as follows: singularity...