pore-c
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nanoporetech
Pore-C support
Bumps [certifi](https://github.com/certifi/python-certifi) from 2021.5.30 to 2022.12.7. Commits 9e9e840 2022.12.07 b81bdb2 2022.09.24 939a28f 2022.09.14 aca828a 2022.06.15.2 de0eae1 Only use importlib.resources's new files() / Traversable API on Python ≥3.11 ... b8eb5e9 2022.06.15.1...
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Hi, When I typed "tox -e snakemake --notest" for the installation, I got the below errors. ### ERROR: unknown environment 'snakemake' ### How can I handle it?
I have never run those kind of pipelines from PC not from cluster. Could you please help me to run it? What I have to install to be able to...
Hi all, Hope this email finds you well. I have questions for you about the Pore-C pipeline. The program was installed according to these links. https://github.com/nanoporetech/pore-c https://github.com/nanoporetech/Pore-C-Snakemake A simple test...
Bumps [distributed](https://github.com/dask/distributed) from 2.30.1 to 2021.10.0. Commits 63ebaea bump version to 2021.10.0 1670cf8 Ensure resumed flight tasks are still fetched (#5426) cdc68cc AMM high level documentation (#5456) 33d83bc Provide stack...
Bumps [distributed](https://github.com/dask/distributed) from 2.30.1 to 2021.10.0. Commits 63ebaea bump version to 2021.10.0 1670cf8 Ensure resumed flight tasks are still fetched (#5426) cdc68cc AMM high level documentation (#5456) 33d83bc Provide stack...
Bumps [numpy](https://github.com/numpy/numpy) from 1.19.5 to 1.22.0. Release notes Sourced from numpy's releases. v1.22.0 NumPy 1.22.0 Release Notes NumPy 1.22.0 is a big release featuring the work of 153 contributors spread...
Bumps [numpy](https://github.com/numpy/numpy) from 1.19.5 to 1.22.0. Release notes Sourced from numpy's releases. v1.22.0 NumPy 1.22.0 Release Notes NumPy 1.22.0 is a big release featuring the work of 153 contributors spread...
I was just reading your nice nature biotech paper and it has more detail now about what the pore-c tools do. I was interested in this graph based concatemer alignment...
Hi, I am trying to install it on HPC (PBSpro) but II got this error. Followed "Developing the Snakemake pipeline" 1. Conda activated: tox and snakemake 2. git clone pore-c.git...