ont_fast5_api
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--filename_base behaves differently in 'fast5_subset'
It does not automatically add the underscore "_" documented in note-1. I haven't tested 'demux_fast5' yet but I'll get around to it soon.
Hi @AAnnan -- thanks for letting us know. We'll have a look.
Hi @fbrennen, it looks like the underscore is also omitted in 'demux_fast5'.
It's already stated implicitly but it could be worth clarifying in the docs that 'demux_fast5' can also use as summary file the Guppy output file sequencing_summary.txt
if barcoding was enabled (via the --barcode_kits argument).