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--filename_base behaves differently in 'fast5_subset'

Open AAnnan opened this issue 3 years ago • 2 comments

It does not automatically add the underscore "_" documented in note-1. I haven't tested 'demux_fast5' yet but I'll get around to it soon.

AAnnan avatar Aug 12 '21 09:08 AAnnan

Hi @AAnnan -- thanks for letting us know. We'll have a look.

fbrennen avatar Aug 12 '21 09:08 fbrennen

Hi @fbrennen, it looks like the underscore is also omitted in 'demux_fast5'.

It's already stated implicitly but it could be worth clarifying in the docs that 'demux_fast5' can also use as summary file the Guppy output file sequencing_summary.txt if barcoding was enabled (via the --barcode_kits argument).

AAnnan avatar Aug 12 '21 12:08 AAnnan