modkit icon indicating copy to clipboard operation
modkit copied to clipboard
verified publisher icon nanoporetech

PCA for modification distribution

Open kamaloxfordpathology opened this issue 7 months ago • 1 comments

Hi,

Hope you are well. Is there a tool/strategy to make PCA plot for each modification showing the similarity between replicates. Does the distribution of m6A cluster between replicates?. Thanks

Best, Kamal

kamaloxfordpathology avatar May 20 '25 09:05 kamaloxfordpathology

Hello @kamaloxfordpathology,

There isn't a function like that in Modkit, but I've asked my team if there is a recommended tool. I'll circle back.

ArtRand avatar May 22 '25 14:05 ArtRand