modkit
modkit copied to clipboard
Error during merging bedmethyl files
I am trying to merge two bedmethyl files, each produced from 2 different samples, using this command modkit bedmethyl merge sample_a.bed.gz sample_b.bed.gz > merged.bed
I get this error error: unrecognized subcommand 'bedmethyl'
Usage: modkit <COMMAND>
For more information, try '--help'.
when I used modkit --help I didn't find bedmethyl merge as a subcommand, would you help please?
Hello @ralanany,
Which version of modkit do you have installed. The bedmethyl merge command was introduced in 0.4.2.