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IGV shows Coverage not methylation values from BedMethyl

Open sahuno opened this issue 1 year ago • 1 comments

i want to see methylation values (column 11) not coverage (column 5, score) when i upload my bedMethyl file to IGV. how can i do that? i'm following the issue with IGV and it seems everything is working good. https://github.com/igvteam/igv/issues/1396

Screenshot 2024-10-03 at 1 04 44 PM

sahuno avatar Oct 03 '24 17:10 sahuno

Hello @sahuno,

I apologize for the slow response, I've been OOO.

I'm using IGV 2.17.4 and if I name by file with the extension .bedmethyl then IGV will show me all of the data fields.

image

ArtRand avatar Oct 09 '24 21:10 ArtRand

thanks

sahuno avatar Oct 11 '24 06:10 sahuno