flappie
flappie copied to clipboard
Flip-flop basecaller for Oxford Nanopore reads
Hello, It is the first time I am doing the basecalling on raw ONT data and I would like to run Flappie on the fast5 data. I have a few...
Hi- When trying to run flappie in parallel I get the following error: ``` export OPENBLAS_NUM_THREADS=1 module load openblas/0.3.4 module load openmpi/4.0.1 find $reads_dir -name *fast5 | parallel -P 2...
Multi-read support for Flappie will come eventually but, since it is a research tool rather than a product, this isn’t a priority. Features proto-typed in Flappie will eventually be released...