dorado icon indicating copy to clipboard operation
dorado copied to clipboard

dorado RNA m6A basecall model

Open yinyuanmtu opened this issue 1 year ago • 1 comments

Dear developers, I am wondering whether the dorado RNA base call models (both the m6A DRACH motif model and all-context model) will work for rRNA and organellar RNAs. I have seen pretty good m6A base calling for poly(A) mRNA, but a lot of failed base calling for chloroplast RNAs, mitochondria RNAs and rRNAs. Note these different types of RNA that I mentioned are derived from same RNA 004 dataset. I would greatly appreciate your thoughts on this matter. Many thanks!

yinyuanmtu avatar Jul 16 '24 14:07 yinyuanmtu

Hi @yinyuanmtu, this type question is probably best placed on the Nanopore Community.

HalfPhoton avatar Jul 18 '24 09:07 HalfPhoton