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Execute the workflow

Open Oksanak22 opened this issue 2 years ago • 0 comments

I create and activate the env:

  1. [name@beluga2 ~]$ virtualenv venv_pore_c && source venv_pore_c/bin/activate
  2. [name@beluga2 ~]$ pip install --no-index --upgrade pip
  3. [name@beluga2 ~]$ pip install --no-index pore_c After I tried to execute the workflow locally: (venv_pore_c) [name@beluga2 ~]$ snakemake --cores $N

And I got an error: Error: no Snakefile found, tried Snakefile, snakefile, workflow/Snakefile, workflow/snakefile.

Do you have any idea how to fix this error? Thank you

Oksanak22 avatar Oct 17 '22 16:10 Oksanak22