mweberr

Thanks for looking at the example. In my examples, mainly from bacterial genomes, it is actually the first point you recognized : the entire molecule with all genes are reversed,...

Hi had a similar issue. You need to add the orientation also to the dummies : `dummies$orientation

I also would support a solution for long DAG building times, while I am waiting for a 500,000 jobs DAG creation. Wondering if this is feasible at all.

Thank you Sebdu132 for this very interesting explanation. I studied the same plot wondering about the high number of 100% matches. I will implement this in my code to compare...

Hi Charlie, thanks for this great help. It really took a while to digest the different variable types. But know I found the issue. For me I would like to...

Here is an example list of sample names: ``` NA-27750_ID1200_lib8888_7504_1_1.fastq.gz NA-27750_ID1200_lib8888_7504_1_2.fastq.gz NA-27790_ID1201_lib9999_7504_1_2.fastq.gz NA-27790_ID1201_lib9999_7504_1_2.fastq.gz NA-27790_ID1202_lib9999_7504_1_2.fastq.gz NA-27790_ID1202_lib9999_7504_1_2.fastq.gz {A}_{sample}_{lib}_{B}_{C}_{rep}.fastq.gz ``` The A part varies in combination with C, while I have not figured...

I had a similar issue when running multiple parallel SMR runs using Snakemake. It is important to specify a separate working directory for each run, otherwise the default working directory...

I also have the same issue, that the sorted order of the node labels needs to be changed to minimise crossing of flows. Here is the same issue for dhe...