Marius van den Beek

Results 192 issues of Marius van den Beek

This is a breaking change for the API, it is motivated by https://sentry.galaxyproject.org/share/issue/3970e49a695f4600bcaeae55021555a9/: ``` Message Unexpected error Stack Trace Newest FileNotFoundError: [Errno 2] No such file or directory: '' File...

area/API

People really just want the list paired builder instead.

kind/bug
kind/enhancement
area/UI-UX
kind/refactoring

Map over runtime inputs don't work and we don't want them to work, explicit inputs should be defined. If you do use them you'll run into https://sentry.galaxyproject.org/share/issue/b44a7a1627854e35b5b73484faa3bf01/: ``` NotFound: cannot...

kind/bug
kind/enhancement
area/UI-UX
area/workflows

Many users don't really know how to create collections of the right type. We now display the required collection type in data collection parameters: ![Screenshot 2024-08-14 at 13 27 39](https://github.com/user-attachments/assets/45671cad-a3e7-4aee-b785-4d8e422cc59b)...

kind/enhancement
area/UI-UX
area/upload

It's time to rip off the band-aid, I think https://github.com/galaxyproject/galaxy/commit/409aef569ff93d01c841309592e425849a1beb22 should have fixed this. It likely was only ever a problem if the job handler node is also doubling as...

area/documentation
area/testing
area/jobs
area/admin

**Describe the bug** Dataset collection elements cannot be dragged into tool form. Enter a collection and attempt dragging the element. **Galaxy Version and/or server at which you observed the bug**...

kind/bug
area/UI-UX

This is on 24.1: This is the history: if you enter a collection:

kind/bug
area/UI-UX

Not for this PR, but maybe we should bake that into `errorMessageAsString` _Originally posted by @mvdbeek in https://github.com/galaxyproject/galaxy/pull/18532#discussion_r1713984625_

kind/enhancement
area/UI-UX

We should move them elsewhere, maybe a directory in https://github.com/galaxyproject/galaxy-test-data and resolve them as we do for tool test data. lib/galaxy/datatypes/test alone accounts for 37M out of 51MB in lib/galaxy,...

kind/enhancement
help wanted
kind/refactoring

Would fix https://github.com/galaxyproject/galaxy/issues/18572#issuecomment-2239199496, and prevent further abuse of galaxy_infrastructure_url, with the downside that users would receive links that don't correspond to their subdomain server if they had been using one....

area/documentation
area/admin