Michael Milton

Results 334 issues of Michael Milton

If I add a worker-level gunicorn hook to my `gunicorn_conf.py`, for example: ```python accesslog = '-' loglevel = 'debug' errorlog = '-' capture_output = True def post_request(worker, req, environ, resp):...

investigate

Solves the issue documented here, where combining two schemas, each with different `SCHEMA_OPTS`, need to be combined: https://github.com/marshmallow-code/marshmallow-jsonapi/issues/3 My solution automatically creates a new `SchemaOpts` subclass that inherits from both...

It seems to be as simple as this: if the `-n` (the [Parallel Execution](http://pydoit.org/cmd_run.html#parallel-execution) flag) is used, any `PythonInteractiveAction`s that use the built-in `input()` function fail with `EOFError: EOF when...

bug

By default, I think most users would want to serialize *all* fields on the input data, rather than *none*. Is it possible to change this default behaviour? This is a...

## New feature I would like to be able to produce a single channel with multiple named values (ie a `Map`) from my processes, ie `my_proccess.out.view()` should return: ``` [a:abc,...

pinned
lang/processes

We currently have static types for the fields of most (all?) `ast` classes, but none of these have typed constructors, e.g.: https://github.com/python/typeshed/blob/62cde013659b4714b6eefe14cecb4b6752b33570/stdlib/_ast.pyi#L79-L86 I think technically this might be because none...

type-improvement

## Motivation Polars types (DataFrame etc) can be converted to `ndarray` types, and indeed this has already been implemented. What isn't implemented is a nice trait that allows us to...

rust
enhancement

Currently it is not possible to create a column of an arbitrary type. `AbstractColumn` is very close to being not abstract, and indeed the JavaDoc suggests that `emptyCopy()` is the...

I'm attempting to run a HaplotypeCaller job that requires that the BAM and BAI file are in the same directory. However, for some reason Cromwell is putting the inputs into...

Needs Triage

*Created with consultation with @kaushik-work* # Use cases It is a common desire to run an entire script as a CWL step. For example, the user might be converting a...

proposal
make running scripts easier