mthang

Thank you for your speedy response ! We downloaded both of Kracken2 DB which already comes with the Bracken DB/index for 6/7/2022. The following bracken indices are found inside the...

@iqbal-lab Thank you for speedy response ! I didnt expect to receive the response so quick. I understand it's a holiday season, so this issue can wait. I ran the...

@iqbal-lab I finally found the bug that caused the issue which is a python package I used in the conconating prg fasta files. By default, the package I used removes...

@bgruening I just had a quick look at this tool and it requires pbi index (pacbio index) for each input bam file. I dont think Galaxy code base supports pbi...

I think so . is this tool urgent for delivery?

Wrapping this tool can be very straightforward, but it is always a challenge to make the output data produced by Pacbio tool compatible with Galaxy code base at this point....

I just found the issue causing the error above. It was due to the unsorted bam produced actc as an output, so I need to sort the bam file with...

The first version of this wrapper only can take a single file as an input, so we need to improve this wrapper for multiple input files. I will let you...

Easy ! Thank you for the pointer.

@bgruening My apologies for the mess of the [pear.xml ](https://github.com/galaxyproject/tools-iuc/pull/5567/commits/01d0c8e111e8d1a573454b387d9dd066d524afc0) commit leading to the subsequence issues. I have several attempts to clean up my commits, but I got no luck...