Modesto

I got the following Bowtie2 error: Error in rule bowtie2_map: jobid: 8 output: ctrl_mc/assembly/mc.index, ctrl_mc/assembly/mc.index, ctrl_mc/assembly/mc.sam, ctrl_mc/logs/bowtie2map.log shell: bowtie2-build -o 3 --threads 18 -q ctrl_mc/reference_selection/mc.refseq.fna ctrl_mc/assembly/mc.index 1>> ctrl_mc/assembly/mc.index 2>&1;bowtie2 -a...

Hi, I got some errors generated during installation on Catalina MacOS 10.15.7, related with _cstdaling_ library. I'm copying the output below. Any ideas?? Thanks In file included from ./src/utils/breadth.cpp:2: ./src/utils/stdc++.h:55:10:...

add_to_quarto.R script cancelled the link-external-newwindow option

1

Hi, Thanks for this great package. I'm using it in the materials of a new course I'm writing in quarto and when I used your (great) *add_to_quarto.R* script my exercises...