Mostafa Jahanifar

Vahadane stain-norm fails

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* TIA Toolbox version: 1.1.0 * Python version: 3.9 * Operating System: Linux ### Description We have been investigating some of the Vahadane stain normalization algorithm and we realize that...

System used: Ubuntu 18.04 Tensorflow-gpu 2.1 ----------------- I used the "2_model_SimCR.ipynb" to train a model. After two epochs, the loss function returns "nan" values and messes up the training. I...

NEW: Add NuClick architecture

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This PR adds NuClick architecture, as described in the paper below, to the toolbox. > Koohbanani, Navid Alemi, et al. "NuClick: a deep learning framework for interactive segmentation of microscopic...

🐛 Add Warning for `VahadaneExtractor` Algorithm Instability

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This PR adds a warning to the VahadaneExtractor class to inform users about the algorithm's instability due to changes in the dictionary learning algorithm in scikit-learn versions > 0.23.0 (see...