dcmstack

dcmstack copied to clipboard

Debian packaging.

3

This is a complete Debian packaging. Please consider merging this into the repo -- most likely into a "debian" branch. This way anyone obtaining the source could build a Debian...

mih

What is the current state with respect to enhanced MRI (3D DICOMs)?

8

I just tested an enhanced MR image from a Siemens device and got an exception telling me that `time` is missing: > The extension is not valid: Missing required base...

Spenhouet

Embedding of meta data does not work for multi channel (RGB) data

3

_Pretext: I'm painfully aware that this package is no longer maintained. But we have no alternative and our only hope is to wait patiently for https://github.com/nipy/nibabel/issues/977. I'm still reporting this...

Spenhouet

dcmstack.dcmstack.InvalidStackError: The DICOM stack is not valid: Slice spacings are not consistent

8

 anyone help me? Thx!

junliu-cn

ValueError: could not convert string to float

1

Greetings-- Just trying out dcmstack --embed-meta option with a 4D dataset (3 space, one time) comprising many 2D DICOM slices acquired on a new Siemens Prisma 3T scanner. See attached...

hamiltonjp

We could be more space efficient by storing unscaled integer data into the Nifti and setting the slope/intercept.

moloney

Hi, The automatic conversion tool is cool. I have a question about the DICOM sorting. In the documentation, ' It is recommended that you sort your DICOM data into directories...

qinqian

Explanation for json file, PhaseEncodingDirectionPositive

1

Hi, i have a question about this parameter in the json file that I generated, what doest it mean if the **PhaseEncodingDirection is COL**, this means the real phase encoding...

anbai106

original dicom voxel order

2

Hello I use dcmstack to convert the dicom with the .to_nifti function with voxel_order='LAS' but I get into trouble with diffusion data to get the correct diffusion direction. So for...

romainVala

ImageOrientationPatient and ImageType issues for creating stacks.

1

There were two issues which were preventing many exported DICOM folders from stacking properly for me with your package. 1) For whatever reason, there is often a small amount of...

davecg