dcmstack
dcmstack copied to clipboard
moloney
DICOM to Nifti conversion with meta data preservation
Hello: Thanks for your work, but I maybe have a very stupid question: your convertor works for all the machines or not? I tested with Siemens, GE, Philips, but I...
Hi Brendan Would you consider making me a collaborator on this repo, so I can do things like merge pull requests? I promise to check with you before doing anything...
[Brain Imaging Data Structure (BIDS)](https://docs.google.com/document/d/1HFUkAEE-pB-angVcYe6pf_-fVf4sCpOHKesUvfb8Grc/edit#) is a new specification describing how a neuroimaging dataset should be organized and described. Part of the standard are JSON sidecar files with acquisition parameters...
I am trying to convert Philips DICOMs from a ~1 hour scan. About 36k single-slice DICOMs in a single directory, several image series together. The total size of the tarball...
The code is barely documented and does not entirely conform to pep8. I see this pull request as a chance to continue working on the documentation and code standards until...
I tried the branch enh-arbitrary-dimensions on Philips 4d data and when specifying LAS as voxel_order, the IS axis seems reversed.
Often DICOM files are bundled in tar files. It would be awesome if Dcmstack could support reading them directly.
Hi, when using dcmstack with [this Dataset](https://www.ircad.fr/research/data-sets/liver-segmentation-3d-ircadb-01/), there seem to be fields in the DICOM header which have a VR set, but contain no actual value. The conversion step then...
We noticed that `MetaExtractor` fails in `_get_elem_value()` in case some DICOM fields are empty / are of length zero. For example, if `PatientWeight` is included in a dataset, but empty,...
