Michel Lang
Michel Lang
As @berndbischl said, it is not yet supported. A simple version would not be too hard to implement. It all depends on the interface you need. What would be relatively...
> Wouldn't it make more sense to explicitly not try this in `batchtools` and use a workflow tool for job dependencies, like [`drake`](https://ropensci.github.io/drake/)? For more complex scenarios and to ensure...
Thanks for reporting. I guess I need to implement something like `cf$startCluster()` and `cf$stopCluster()` and call it internally in `submitJobs()`. This has the drawback that `submitJobs()` would have to wait...
Please make a backup of the registry, I want to have a look at it next week.
After the backup, just re-submit the job in question. And all other jobs with "time.queued" < 0.
Maybe even look into making the file system operations abstract, so we can switch them out with a network proto.
Can you call `squeue` without specifying `--clusters`? Can there be duplicated job.ids if you query multiple clusters?
How about this approach: * You specify a comma separated list of clusters to the constructor * For `submitJobs` you select one of the clusters via a resource * The...
Ah wait, this does not work for `killJobs()` 😞
https://github.com/mllg/batchtools/pull/179 Can you please comment if 1. This is now flexible enough for you guys 2. if we still need the `clusters` argument 3. if this PR is now obsolete