Melanie Kirsche

Hi Wouter, Thanks for bringing this to my attention! I will plan on updating this in the next Jasmine release to conform with these standards. Thank you!! Melanie

Hi, Thanks for the suggestion! Unfortunately, adding support for vcf.gz and .bcf files would require fairly extensive software changes and so there are no plans in the near future to...

Hi, Usually this is because of translocation or BND variants which do not indicate the chromosome of the second breakend involved in the variant (often denoted by the CHR2 INFO...

Hi, Thanks for sending these files! It looks like the error is due to Jasmine not handling single breakends correctly (breakends which don't specify the other genomic position that the...

Hi, I have made a new release of version 1.1.5 which includes a fix for this. It will likely take up to a day before it gets through the bioconda...

Hi MJ, To clarify, are you getting an empty VCF output when you run the latest version of Jasmine? When I run Jasmine on the two files you provided, I...

Hi, I am trying to replicate this by following the same commands, but I am not getting an empty file. > Number of threads: 1 > Merging complete - outputting...

Hi MJ, I'm happy to hear that fixed your issue! I have updated the Github build of Jasmine to output a warning when passed a non-existent file list, and it...