mickey8

Losing clusters during correction stage

1

After the clustering stage, the output given was "20623 gene clusters found". After taking the clusters.out file and moving through the correction stage, 8074 clusters were left in the consensi.fq...

reduce redundancy in direct RNA long-read only assembly?

1

Hello, I used rnabloom to construct a transcriptome from direct RNA data with the following: rnabloom -long all_reads.fastq -stranded -t 25 -outdir dir/ -u true The rnabloom.transcripts.fa assembly file seems...