Meeta Mistry comments

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                                            Meeta Mistry

missing bias value for Mov10_oe_3

Once your run Qualimap check if you are also missing this in your report

many to many warning when assigning annotations to markers in scRNAseq

assigning @hwick since we might need to discuss what the best alternative is

add an image to represent the Seurat object

add homework question/exercise to explore the Seurat object

add an image to represent the Seurat object

I think @Gammerdinger and @nsohail19 were working on/discussing this image at some point? If we can get this done for the end of the month that would be great (including...

adding more on integrating data

maybe start a markdown and jot notes as it comes

updating the lesson goals, challenges, recommendations

As many of the lessons have evolved over time - these points do not always line up with the content. Additionally there are redundancies. Consider removing them? @Gammerdinger @nsohail19

Trouble downloading ' scRNA-seq filtered counts' from the Pseudobulk DEG analysis tutorial

@ronfinn no it hasn't been resolved but we will look into it.

Trouble downloading ' scRNA-seq filtered counts' from the Pseudobulk DEG analysis tutorial

Hi, I'm sorry we had trouble locating the file as there has been some reorg in our group. Please try [this link](https://www.dropbox.com/scl/fi/1y24rh3ybkkkbzt7lcj8k/scRNA-seq_pseudobulk_filtered_sce.rds?rlkey=e8vnlietbwvefyunv0ynv1l5s&dl=1) and let us know if it works out....