mistClaud issues

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                                            mistClaud

Problems about the CN & SV input.

Dear all, we used GATK for CN info and lumpy for SV. The input files are attached. We use LINEAR_COPY_RATIO * 2 as total CN. [genotyped-denoised-copy-ratios-229005560FD.vcf.gz](https://github.com/parklab/ShatterSeek/files/9495128/genotyped-denoised-copy-ratios-229005560FD.vcf.gz) [229005560FD_lumpySV_gt.zip](https://github.com/parklab/ShatterSeek/files/9495141/229005560FD_lumpySV_gt.zip) Here we got...