miparrama
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miparrama
The command I run is part of the [CheckV](https://bitbucket.org/berkeleylab/checkv/src/master/) pipeline: diamond blastp --outfmt 6 --evalue 1e-5 --query-cover 50 --subject-cover 50 -k 10000 --query ./metaviralspades/virsorter2/tmp/proteins.faa --db /home/m.p.martinez/resources/checkv/checkv-db-v1.5/genome_db/checkv_reps.dmnd --threads 1 > ./metaviralspades/virsorter2/tmp/diamond.tsv...
I run it on Ubuntu 20.04 LTS.