Miloš Ljubinković
Miloš Ljubinković
Seems to be an issue when using relative paths both for the cwl file and in input files. In this case the location of input file is attempted to be...
When jobs fail during execution you can usually find more info in docker logs. Find the id of the docker container that failed (docker ps -a or something) and call...
When you do "docker inspect" on that container there should be a Cmd part which is the executed command and Mounts which are the mounted files. Might be that a...
Latest v1.0.4 release should have fixes for issues with relative paths. Regarding mounting links, next release should have a redesign of the linking/staging system so we will discuss it when...