Miguel F. Romero

HI, I am unable install IRkernel because of this error when the install.packages function tries to load pbdZMQ: ``` .onLoad failed in loadNamespace() for 'pbdZMQ', details: call: fun(libname, pkgname) error:...

Hi, I have the same problem when running: ```download_eggnog_data.py -H``` I am using the conda installation.

I used the anaconda command to install treeshrink (1.3.7 was installed). After that I installed R (4.2) and ran the script with the test data. It gives me the same...

I installed it from the github repository and then it worked (version 1.3.9).

Hi Lucas, This is the command line: ```gappa examine assign --jplace-path epang_out/epa_result.jplace --taxon-file deftree.taxstrings.tsv --out-dir tax-classification --per-query-results --allow-file-overwriting``` I'm working on the minimal example. Thanks Miguel