Michael Silverstein

Not sure if this is a python3 incompatibility, but I get this import error: ``` --------------------------------------------------------------------------- ModuleNotFoundError Traceback (most recent call last) in ----> 1 import songkick ~/anaconda3/lib/python3.6/site-packages/songkick/__init__.py in ---->...

https://github.com/Emergent-Behaviors-in-Biology/community-simulator/blob/e131d5902a8e95a6d2990ed358015db3822b38f3/community_simulator/__init__.py#L71 Warning: ```FutureWarning: Support for multi-dimensional indexing (e.g. `obj[:, None]`) is deprecated and will be removed in a future version. Convert to a numpy array before indexing instead. N =...

Export distance matrix files

4

### Description of feature While ampliseq outputs beta diversity results by metadata feature to `results/qiime2/diversity/beta_diversity/DISTANCE-METRIC_distance_matrix_METADATA-FEATURE`, it does not include the raw distance matrix. I see that these matrices are saved...