Michael Gruenstaeudl, PhD

icon indicating a website link https://gruenstaeudl-lab.com/

icon company Fort Hays State University icon location Hays, Kansas icon location Assistant Professor, Fort Hays State University

Results 2 issues of Michael Gruenstaeudl, PhD

Leaf names visible despite show_leaf_name=False

2 comment

The following code is supposed to visualize a minimalistic tree next to a sequence alignment, with the tree leaves displayed as aligned. Especially note the setting `ts.show_leaf_name=False` ``` from ete3...

[question] Using Bactopia on HPC with SLURM workload management

4 comment

I am executing Bactopia on an HPC whose jobs are managed by SLURM, but despite setting `-profile slurm` and a NextFlow config file, Bactopia keeps utilizing only one CPU and...

question