micdonato

I have the same concern as @ArcusGears . I would like to export the raw data and have it normalized by ScanPy. However, I suspect that Scanpy will use the...

seems to be working for me (nothing in stock, but I get the test and the logs seem to be updating regularly)

Thanks all, I will try widget2!

I tried widget2 and it does work on Jupyter lab. The only issue is that clustering is not shown in the heatmap, but I guess it will come later as...

Thanks, it makes sense! I think I will use the docker container but I was considering building a Singularity container and pinning pandas will help.

They work roughly the same as Docker containers, it's just a matter to create the right recipe for building them. Usually I install a package locally to see if I...

Hi all, and thanks! That is what I tried at first. Unfortunately, it seems that Singularity fails to actually build the image, as packages that should be installed are missing:...