Marcus H Y Leung

If it is not part of the initial conda package maybe can install separately within the enrichm environment? https://anaconda.org/conda-forge/fuzzywuzzy Marc

Dear geronimp Thanks for the response. There actually is no error message. The run appears to have run fine. Just that the output files do not seem complete. I notice...

Hi thanks for the quick response. I would greatly appreciate if the script can be changed to reflect the expanded option. The reason for it is that we are trying...

Hey! So this is my command and error: ``` extract_kraken_reads.py -k [sample].krk -s1 [sample]_1.fastq -s2 [sample]_2.fastq -o [sample]_extract_1.fastq -o2 [sample]_extract_2.fastq --taxid 1164002 2768834 2743575 2664899 2663009 2652307 2610896 2598453 2576376...

that would be great! Thanks for your help!