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☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs

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It would be helpful if graphbin2 allowed for gzip'ed (and bz2 compressed) input, especially given the file sizes generated by metaspades (no minimum length cutoff, so all contigs included)

enhancement

I have already requested this for GraphBin, but would be great to get it in GraphBin2 and also in metaCoAG (great tools). Whenever trying to run GraphBin with an assembly...

enhancement

Hi there, Thank you for your work in developing this tool. I have two separate but somewhat related issues that I'm hoping you can help out with. 1. I'm running...