Michael Dietze

I'd lean towards having the posterior files stay at `pfts$$posterior.files` and update the code that reads these to be smart enough to distinguish a mcmc file from a post.distns.Rdata. `pfts$$outdir`...

@infotroph I get the point about SA not mapping to pfts now that we're doing multi-site SA. I'm OK with the proposed restructuring to have a directory (or directory hierarchy)...

@AritraDey-Dev the decision on the last PEcAn call was to remove the PHP from the README and to add the Quarto notebook as the prefered entry point into learning PEcAn....

Correct, for the current release candidate (v1.10.0) we're having the README point to the notebooks instead of the webUI, but deferring the complete removal of the webUI and associated docs,...

> a more explicit flag sample_jointly, set to TRUE when reading from MCMC and FALSE otherwise. I'd propose "set TRUE by default, but sample marginally when insuffient information is provided...

* Joint vs marginal: My recommendation for now would be just to have this as a parameter/flag that defaults to joint and then when we get to loading a prior...

I agree with the first part of the issue, but I'm not sure I agree that the solution is to generate the run ids post hoc. That idea will end...

I like this idea. It's also more transparent than stuffing numerous distinct dataframes into one RData object, which is what we're doing now.