Matthijs van Eede

Print functions for output from anatGetAll (and others?)

2

The mincMultiDim classes have a print function. This should probably also be implemented for some of the outputs of anat\* functions. Right now, printing the output of anatGetAll gives you...

mincPlotSliceSeries has rendering issues from R 3.3.1 with RMINC 1.4.2.1

1

Any slice that contains stats in the range you provide to mincPlotSliceSeries (using low and high) renders the non-of-interest areas in white. I.e., the background image is not visible. Running...

mincFDR - method "qvalue", "pFDR: and "fastqvalue" are broken-ish

1

The qvalue package has been removed from CRAN, and can not be installed anymore through install.packages("qvalue"). This currently breaks the above mentioned methods for mincFDR. Also, when mincFDR is called...

provide better feedback on corrupt MINC files

2

When MINC files get corrupted, you can see error messages like this when loading them: DF5-DIAG: Error detected in HDF5 (1.8.10-patch1) thread 0: #000: H5Dio.c line 174 in H5Dread(): can't...

mincGetVoxel and mincGetWorldVoxel fail on float MINC input files

2

Where fail means that values are retrieved, but they are incorrect.

Doesn't seem to work now in the presence of the MINC_COMPRESS environment variable.