Matthew Brush

Results 50 issues of Matthew Brush

At present, too many predicates are included under the 'increases amount or activity of mixin. e.g. most of the affects /increases / decreases predicates created for CTD data do not...

working-group/predicates

The TRAPI Attribute object includes a `value_type_id` afield to indicate the "type" the thing reported in the 'Attribute.value` field. We need to decide if we would like this field to...

working-group/EPC

**Describe the bug** The list of association slots reported at https://biolink.github.io/biolink-model/docs/association_slot.html does not seem to include slots that are children of another association slot. **To Reproduce** For example, 'knowledge source'...

documentation

In short, we need to define a standard pattern for representing references to publications/documents that describe the method used to generate knowledge expressed in an edge. The use case behind...

working-group/EPC
working-group/MolePro

added "PMC" to the end of the namespace for expanding the PMCID prefix to "PMCID": "http://www.ncbi.nlm.nih.gov/pmc/PMC", to address #1366.

We should review the properties of the [Creative Work](https://schema.org/CreativeWork) class in schema.org and make sure the CRO has roles defined to cover each type of contribution represented by these properties....

All role definitions should be phrased consistently, and describe roles as being of the same ontological type. At present, some define the class as a **role** (e.g. educational role =...

It was recently proposed that we develop a data model specification based on the CRO to support clear and concise representation of contributions made by agents to research artifacts. I...

The 'resources role' is defined from the perspective of a project or publication to which an agent **provides** a research resource: "Provision of study materials, reagents, materials, patients, laboratory samples,...

The name 'author role' suggests that all roles captured for authors of a publication should come from this hierarchy. But this is not the case. Roles for publication authors can...