Martín Beracochea

Results 13 comments of Martín Beracochea

This works for me, thank you @pansapiens and @riccardomurri :1st_place_medal: . I'm running this with Openstack Ussuri (http://docs.embassy.ebi.ac.uk/userguide/Embassyv4.html#about-version-4), with a slurm cluster using Ubuntu Cloud 18.04.

A queue mapping procedure would be very useful. One common case is using different queues based on the memory required: For example a mapping.yml file such as: ```yml # first...

## Review checklist for @mberacochea ### Conflict of interest - [x] I confirm that I have read the [JOSS conflict of interest (COI) policy](https://github.com/openjournals/joss/blob/master/COI.md) and that: I have no COIs...

> @mberacochea, @rcannood - could you update us on the state of your reviews? Thanks! Busy last couple of weeks. I'm aiming to get the review done this week.

# My review of ALPPACA. ALPPACA is a well written Nextflow pipeline, the code is clean and easy to follow. The paper is very well written and clearly states the...

@mr-c Can you please elaborate on this?. I would like to improve this if possible.

Really helpful. This should go on the wiki

Not sure if it's relevant, but BWA 0.7.17-r1198-dirty doesn't have issues mapping the same files. ```bash bwa-0.7.17/bwa mem \ -t 16 -v 4 \ hg38.fa \ -o temp \ ERR4705259_1.fastq.gz...

Hi @vasimuddin any updates on the release? Thanks!

My team is currently adopting nf-core tools and we've noticed this limitation. I'm interested in working on adding support for 'hybrid' subworkflows. Any guidance on how to begin would be...