Matthew Belousoff

Issue with RTX3080

4

Initially the default pytorch isn't compatible with an RTX3080 GPU. So I edited the install.sh script: Line 45 for my system should have read: `conda install pytorch torchvision torchaudio pytorch-cuda=11.7...

Issue with parse_pose_star

1

This appears to be an intermittent issue. I was helping a collegue get cryodrgn running and when I ran the command: `cryodrgn parse_pose_star run_data.star -o poses.pkl` It produced the following...

Addition of MRC mode 12 support

4

Hey guys, As we write most of our particle stacks out in RELION, which allows for 16bit float mrcs (MRC mode 12), its a bit of pain converting it back...

Compilation issues...

4

Comrades!!! I was thinking of using SIMPLE for some fun projects over here, and decided to try and compile it on a new workstation. So first some details: OS: Linux...

Issues with trying to get a cryoSPARC dataset running in RELION

11

So I hate to write this one, but many of my students are refusing to use RELION, and I'm not convinced the results that they get from other software is...

Unexpected behaviour in train_vae

2

Hey guys, So to begin, I'm using the cryodrgn version 3.4.3, but I have observed this behaviour in older versions as well. The system is a 4 GPU (RTX4000 Ada)...