mbacino
mbacino
running the below sample sheet I got the error: [2024-05-01 08:11:52.305] [error] Sample sheet /wynton/home/lynchlab/ms-bacino/24_04_08_Fosmid_hits_EDY/input_files/corrected_24_04_30_ss.csv contains invalid column flow_cell_id flow_cell_id,kit,sample_id,experiment_id,barcode,alias FAY52961,SQK-RBK114-96,mgolf,hit,barcode01,A FAY52961,SQK-RBK114-96,mgolf,hit,barcode02,B FAY52961,SQK-RBK114-96,mgolf,hit,barcode03,C FAY52961,SQK-RBK114-96,mgolf,hit,barcode04,D FAY52961,SQK-RBK114-96,mgolf,hit,barcode05,E FAY52961,SQK-RBK114-96,mgolf,hit,barcode06,F
I generated the sample sheet using excel. It was adding a BOM for UTF-8. The solution that worked was creating a csv on the HPC cluster, rather than importing it....