Maxwell J Farrell

Problem with sublime recognizing processing-java

2

Hi I have installed Processing via flatpak on Pop OS, and successfully symlinked processing-java to /bin/processing-java processing-java works via the terminal, but sublime is still throwing the error "[Errno 2]...

I got a new laptop and after setting it up I have been using SendCode with the linux terminal. This works, but I've grown frustrated with the ctrl+enter creating a...

I am plotting species interaction data with gheatmap and wondering if it is possible to align a second phylogeny to the x axis of the heatmap?

limits and p_limits not truncating stat_eye()

1

I'm plotting some conditional draws and some values are very extreme, leading to the stat_eye plots having very long tailed distributions, and a lot of empty area of the plot....

Discrepancy between summary() and tab_model() for brms models

5

I'm having trouble formatting the summary of my hierachical brms model via tab_model() I would like to essentially re-create what I see with summary(model) via brms. I see that the...

geom_highlight compresses the tree slightly

1

I am trying to add a geom_hilight layer to identify two clades in a phylogeny. The tree is then aligned to a heatmap with cowplot. The alignment works well without...

One instance of HostFamily is in single quotes

4

'percalatidae' is the only family name with quotes around it ``` require(dplyr) require(vroom) virion

404 error when installing taxonerd 1.5.4 in R

1

Just wanted to flag that using the following code from the README leads to an `HTTP status was '404 Not Found'` error when installing: `install.packages("https://github.com/nleguillarme/taxonerd/releases/download/v1.5.4/taxonerd_for_R_1.5.4.tar.gz", repos=NULL)`

linpred_draws fails with brms model

2

I am trying to use the function linpred_draws() on a brms model object: ``` draws

sql table failed to generate and I can't delete it to try again

2

I got the error: `Error: no such table: accessionTaxa` so am trying to re-download the database. However, R seems to think it already exists. I deleted the source files in...