Matthew Meier

This is still an issue as far as I can see. Did anyone come up with a workaround?

Hello, Just wanted to say I also am experiencing this issue. I think changing all instances of `binom_test` to `binomtest` should do it.  Thanks!

I guess the added complexity is that they also changed the syntax a bit. So instead of [successes, failures] it needs to be [successes, trials] For example: ``` pval =...

One more issue is that, at least in some edge cases, there are going to be 0s for sparse data where not every mutation subtype is getting sampled. I don't...

Hi @mdbarnesUCSD , have you had any luck looking into this? I think any new installs of the software are going to be broken, unless someone has a workaround that...

Thanks for that information! I appreciate it. Nice simple solution. I'll try this workaround in our environment until a permanent fix is available.

Thanks @mdbarnesUCSD ! I'll let you know when we've tested it out.

I'm also curious if anyone has found a solution... I'm having the same problem. At one point I came across this thread and I got it working using the custom...