Matt Speir

Yeah, I think that's correct. Though another weird thing I just noticed about that mouse-organogenesis dataset is that there are some marker genes with pval/qval == 0 which all show...

Ah. Yeah, you're right.

I think GeneCards would be best as it contains a lot of information. Basically, I just want a link to a place with info about gene function. Thanks!

I'll play with cbMarkerAnnotate a little bit and let you know how it goes. And let me think about cbMarkerAnnotate documentation a little bit more. I need to go through...

cbMarkerAnnotate is great. Maybe you can add 'GeneCards' to cbMarkerAnnotate? I feel that would be satisfactory. I do still think it would nice to add GeneCards to the output 'markers.tsv'...

Hmm, maybe the 'Gene Lists' column should be renamed to something like 'Phenotype and Disease' or something as the sites in that column (OMIM, HPO, and COSMIC) are phenotype/disease databases?...

I think just a Gene Cards column with the GeneCards logo being the link (or maybe even 'GC {LOGO}') would be good.

Hi, @kriemo. Interesting feature request. Do you have any images or sketches of what this would look like? As an alternative, would a "hide all but selected" option be sufficient?

We now have the 'label by annotation' feature which should allow us to display the labels for the different resolution. @maximilianh I think the next step would be to allow...

Yep, ticket here: https://redmine.soe.ucsc.edu/issues/29299