Matteo Delucchi

Add protocol = "tcp" as argument to dbConnect()

13

### Situation I host a mysql DB in a local docker container. docker-compose.yml ``` version: '3.2' services: db: image: mysql:8.0 command: mysqld --character-set-server=utf8mb4 --collation-server=utf8mb4_unicode_ci volumes: - ./mysql-dockerDB/var/lib/mysql:/var/lib/mysql - ./dockermnt:/docker-entrypoint-initdb.d container_name:...

**early steps** I tried first to install the precompiled version: ``` wget http://cole-trapnell-lab.github.io/cufflinks/assets/downloads/cufflinks-2.2.1.Linux_x86_64.tar.gz tar zxvpf cufflinks-2.2.1.Linux_x86_64.tar.gz rm cufflinks-2.2.1.Linux_x86_64.tar.gz cd cufflinks-2.2.1.Linux_x86_64/ echo -e "\nexport PATH=$PATH:/dataT/dlc/programs/cufflinks-2.2.1.Linux_x86_64 " >> ~/.bashrc ``` which resulted...

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